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Series GSE48654 Query DataSets for GSE48654
Status Public on Dec 11, 2014
Title Genes regulated in mouse liver by expressing ectopically hURI in hepatocytes
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary RNA-seq was performed using the RNA extracted from the bottom half of right lobe of mouse livers. Mice fall into two groups, mutant group which express ectopic hURI and their control littermates which do not express hURI. Two time points were considered in the study, 1-week-old mice, expressing hURI since 1 week (n =3, 4 for control and mutant, respectively) and 8-week-old mice expressing hURI since 8 week (n= 4, 3 for control and mutant, respectively), as hURI is expressed since conception.
Overall design Determination of differentially expressed transcripts over two time points (1 week and 8 weeks) in mouse livers expressing hURI (1 week and 8 weeks).
Contributor(s) Djouder N, Tummala KS, Graña O, González-Pisano D
Citation(s) 25453901
Submission date Jul 09, 2013
Last update date May 15, 2019
Contact name Nabil Djouder
Organization name CNIO
Lab Growth Factors, Nutrients and Cancer
Street address C/Melchor Fernandez Almagro, 3
City Madrid
ZIP/Postal code 28029
Country Spain
Platforms (1)
GPL11002 Illumina Genome Analyzer IIx (Mus musculus)
Samples (14)
GSM1182941 1 week control, replicate 1
GSM1182942 1 week control, replicate 2
GSM1182943 1 week control, replicate 3
BioProject PRJNA210937
SRA SRP026667

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Supplementary file Size Download File type/resource
GSE48654_RAW.tar 14.1 Mb (http)(custom) TAR (of FPKM_TRACKING)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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