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Series GSE48392 Query DataSets for GSE48392
Status Public on Nov 30, 2013
Title Response of mammary tissue to high-LET HZE particle (Silicon ions) radiation or low-LET gamma-rays
Organism Mus musculus
Experiment type Expression profiling by array
Summary Transcriptional profiling of mammary tissue irradiated at 10 weeks of age with either 100 cGy sparsely ionizing gamma-rays, or 10 cGy or 30 cGy densely ionizing radiation (350 MeV/amu Si). Mammary tissue was collected 1 weeks, 4 weeks, and 12 weeks post-irradiation.
Overall design Four radiation treatment groups: sham, 100 cGy sparsely ionizing gamma-rays, 10 cGy or 30 cGy densely ionizing radiation (350 MeV/amu Si). Three time points post-irradiation (1, 4, and 12 weeks). Three or four replicates per time point.
Contributor(s) Tang J, Fernandez-Garcia I, Vijayakumar S, Martinez-Ruis H, Bochaca I, Nguyen D, Mao J, Costes SV, Barcellos-Hoff MH
Citation(s) 24038768
Submission date Jun 28, 2013
Last update date Apr 18, 2017
Contact name Jonathan Tang
Organization name Lawrence Berkeley National Laboratory
Department Cancer and DNA Damage Response
Street address 1 Cyclotron Road, MS-977
City Berkeley
State/province CA
ZIP/Postal code 94720
Country USA
Platforms (1)
GPL11533 [MoGene-1_1-st] Affymetrix Mouse Gene 1.1 ST Array [transcript (gene) version]
Samples (37)
GSM1176954 mouse_mammary_irradiated_100cGy_Gamma_Wk1-post-IR_Rep1
GSM1176955 mouse_mammary_irradiated_100cGy_Gamma_Wk1-post-IR_Rep2
GSM1176956 mouse_mammary_irradiated_100cGy_Gamma_Wk1-post-IR_Rep3
BioProject PRJNA209937

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE48392_RAW.tar 160.1 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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