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Series GSE48068 Query DataSets for GSE48068
Status Public on Sep 05, 2013
Title Architectural niche organization by LHX2 is linked to hair follicle stem cell function
Organism Mus musculus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary To identify direct LHX2 target genes in HFSCs, we performed chromatin immunoprecipitation and deep sequencing (ChIP-seq) analysis using FACS-isolated HFSCs.
Overall design Three independent LHX2 ChIP-seq experiments were conducted.
Contributor(s) Folgueras AR, Fuchs E
Citation(s) 24012369
Submission date Jun 18, 2013
Last update date May 15, 2019
Contact name Alicia Rodriguez-Folgueras
Organization name Rockefeller University
Street address 1230 York Ave.
City New York
ZIP/Postal code 10065
Country USA
Platforms (1)
GPL11002 Illumina Genome Analyzer IIx (Mus musculus)
Samples (6)
GSM1167209 input DNA_replicate1
GSM1167210 LHX2_ChIPSeq_replicate1
GSM1167211 input DNA_replicate2
BioProject PRJNA208938
SRA SRP026168

Download family Format
SOFT formatted family file(s) SOFTHelp
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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE48068_RAW.tar 1.0 Gb (http)(custom) TAR (of WIG)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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