GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
Series GSE47917 Query DataSets for GSE47917
Status Public on Jun 01, 2015
Title Genome alterations in human pluripotent stem cells as very early events highly dependent on cell passaging conditions
Organism Homo sapiens
Experiment type Genome variation profiling by SNP array
Expression profiling by array
Expression profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
Overall design Refer to individual Series
Contributor(s) BAI Q, DE VOS J
Citation(s) 25254421
Submission date Jun 13, 2013
Last update date Sep 20, 2021
Contact name Qiang BAI
Phone +32 (0)4 366 9841
Organization name University of Liege
Department GIGA Institute
Lab Immunophysiology Laboratory
Street address Avenue de l'Hopital 1
City Li├Ęge
ZIP/Postal code 4000
Country Belgium
Platforms (3)
GPL6801 [GenomeWideSNP_6] Affymetrix Genome-Wide Human SNP 6.0 Array
GPL11154 Illumina HiSeq 2000 (Homo sapiens)
GPL13667 [HG-U219] Affymetrix Human Genome U219 Array
Samples (30)
GSM1162366 HD129 line cells at initial passage 16
GSM1162367 HD129 line cells after 10 enzymatic passages
GSM1162368 HD129 line cells after 5 enzymatic passages
This SuperSeries is composed of the following SubSeries:
GSE47914 Genomic instability of human embryonic stem cells in mechanic and enzymatic passaging culture
GSE47916 Expression of four hESC lines in enzymatic and mechanic passaging methods
GSE47946 Transcriptome of embryonic stem cells cultured in enzymatic and mechanic passaging methods [RNA-seq]
BioProject PRJNA208312

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE47917_RAW.tar 1.2 Gb (http)(custom) TAR (of CEL, CHP, CNCHP, TXT)
SRA Run SelectorHelp

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap