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Series GSE47830 Query DataSets for GSE47830
Status Public on Feb 19, 2014
Title Uniform response to aneuploidy in human cells
Organism Homo sapiens
Experiment type Expression profiling by array
Summary There are many different types and origins of aneuploidy, but whether there is a uniform cellular response to aneuploidy in human cells has not been addressed so far. To uncover a uniform transcriptional response to aneuploidy we evaluted the transcription profiles of trisomic and tetrasomic cell lines and cell lines with complex aneuploid karyotypes.
Overall design mRNA expression analysis of aneuploid cell lines derived from HCT116 compared to the HCT116 diploid cell line. With the exception of HCT116 3/3, three biological replicates of the Microarray experiment were performed.
Contributor(s) Dürrbaum M, Kuznetsova AY, Passerini V, Stingele S, Stoehr G, Storchová Z
Citation(s) 24548329, 25205676
Submission date Jun 11, 2013
Last update date Nov 27, 2018
Contact name Milena Dürrbaum
Organization name Max Planck Institute of Biochemistry
Department Maintenance of Genome Stability
Street address Am Klopferspitz 18
City Martinsried
ZIP/Postal code 82152
Country Germany
Platforms (2)
GPL4133 Agilent-014850 Whole Human Genome Microarray 4x44K G4112F (Feature Number version)
GPL13607 Agilent-028004 SurePrint G3 Human GE 8x60K Microarray (Feature Number version)
Samples (14)
GSM1160155 HCT116 3/3_R1
GSM1160156 HCT116 3/3_R2
GSM1160157 HCT116 H2B-GFP 5/4_R1
BioProject PRJNA208051

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE47830_RAW.tar 152.9 Mb (http)(custom) TAR (of TXT)
GSE47830_Supplementary_data.xlsx.gz 1.3 Mb (ftp)(http) XLSX
Processed data included within Sample table
Processed data are available on Series record

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