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Series GSE47701 Query DataSets for GSE47701
Status Public on Jan 01, 2015
Title Whole Genome Analysis of a Well-Differentiated Liposarcoma Reveals Novel SYT1 and DDR2 Rearrangements
Organism Homo sapiens
Experiment type Genome variation profiling by genome tiling array
Summary We used DNA content-based flow cytometry to distinguish and isolate nuclei from clonal populations in a single liposarcoma prior to array comparative genomic hybridization and whole genome sequencing.
 
Overall design We applied DNA content based flow sorting to isolate the nuclei of clonal populations in a single liposarcoma sample prior to array comparative genomic hybridization and next generation sequencing.
 
Contributor(s) Egan JB, Barrett MT, Champion MD, Middha S, Lenkiewicz E, Evers L, Schmidt J, Shi C, Wier SV, Ahmann G, Kortuem KM, Boczek N, Fonseca R, Craig DW, Carpten JD, Borad MJ, Stewart AK
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Submission date Jun 06, 2013
Last update date Mar 21, 2017
Contact name Mitesh Borad
Organization name Mayo Clinic in Arizona
Street address 13400 E Shea Blvd
City Scottsdale
State/province AZ
ZIP/Postal code 85259
Country USA
 
Platforms (1)
GPL9777 Agilent-021850 SurePrint G3 Human CGH Microarray (Feature Number version)
Samples (2)
GSM1155145 L_ANEU_2.3N
GSM1155146 L_ANEU_4.6N
Relations
BioProject PRJNA207362

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE47701_RAW.tar 87.5 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table
Processed data provided as supplementary file

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