GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
Series GSE47657 Query DataSets for GSE47657
Status Public on Sep 25, 2013
Title Differentially expressed genes by anti tumor treatment in human cancer cell lines
Organism Homo sapiens
Experiment type Expression profiling by array
Summary To identify differentially expressed genes by anti cancer treatments (microRNAs, siRNAs and chemical compounds) in human cancer, several cell lines (prostate cancer, renal cell carcinoma and head and neck squamous cell carcinoma) were subjected to Agilent whole genome microarrays.
Overall design Human cancer cell lines (PC3, DU145, LNCap, A498, 786-O, FaDu and SAS) were treated with miRNAs (miR-145, miR-375, miR-23b, miR-24, miR-27b and miR-29a), siRNAs (si-CAV2, si-LAMB3 and si-GOLM1) and chemical compunds (genistein, wogonin and CXCL10).
Contributor(s) Seki N
Citation(s) 23936419, 24091622, 25115396, 29423074
Submission date Jun 05, 2013
Last update date Jun 28, 2019
Contact name Naohiko Seki
Phone +81-43-226-2971
Organization name Chiba University
Department Functional Genomics
Street address 1-8-1, Inohana
City Chiba
State/province Chiba
ZIP/Postal code 260-8670
Country Japan
Platforms (2)
GPL13607 Agilent-028004 SurePrint G3 Human GE 8x60K Microarray (Feature Number version)
GPL16699 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
Samples (24)
GSM1154153 Differentially expressed genes by genistein treatment in PC3
GSM1154154 Differentially expressed genes by genistein treatment in DU145
GSM1154157 Differentially expressed genes by knocking down of CAV2 in A498
BioProject PRJNA207084

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE47657_RAW.tar 507.9 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table
Processed data provided as supplementary file

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap