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Series GSE47484 Query DataSets for GSE47484
Status Public on Jul 22, 2013
Title H3K27me3 is maintained at a reduced level in Suz12(Bgal/Bgal) ESCs [RNA-Seq]
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Suz12(Bgal/Bgal) ESCs express a truncated form of Suz12 fused to Beta-galactosidase. These cells maintain a reduced level of H3K27me3 despite this mutation to a core component of PRC2, unlike Eed-/- ESCs whose H3K27me3 is ablated.
Overall design RNA-seq was performed in wild type and Suz12(Bgal/Bgal) ESCs, here used to demonstrate the coverage of the Suz12 gene in mRNA reads.
Contributor(s) Thornton SR, Boyer LA
Citation(s) 23955559
Submission date May 29, 2013
Last update date May 15, 2019
Contact name Laurie A Boyer
Phone 617 324-3335
Organization name Massachusetts Institute of Technology
Department Biology
Lab Boyer
Street address 77 Massachusetts Avenue
City Cambridge
State/province MA
ZIP/Postal code 02139
Country USA
Platforms (1)
GPL11002 Illumina Genome Analyzer IIx (Mus musculus)
Samples (2)
GSM1151030 Suz12GT_RNA
GSM1151031 E14(wt)_RNA
This SubSeries is part of SuperSeries:
GSE47485 H3K27me3 is maintained at a reduced level in Suz12(Bgal/Bgal) ESCs
BioProject PRJNA205855
SRA SRP023269

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Supplementary file Size Download File type/resource
GSE47484_RAW.tar 283.9 Mb (http)(custom) TAR (of BEDGRAPH)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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