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Series GSE47077 Query DataSets for GSE47077
Status Public on Jun 04, 2013
Title Multi-region copy-number analysis
Organism Homo sapiens
Experiment type Genome variation profiling by SNP array
SNP genotyping by SNP array
Summary Intra-tumour heterogeneity (ITH) foster tumour adaptation and hamper the efficiency of personalised medicine approaches. We investigated the extent of ITH within individual clear cell renal cell carcinomas (ccRCC) by multi-region sampling and copy number analysis.
We analyzed 63 tumour regions and 8 normal samples from eight clear cell renal cell carcinomas using Affymetrix SNP6 arrays.
Overall design All individual tumours were subjected to multi-region sampling and copy-number analysis using Affymetrix SNP6 arrays.
Contributor(s) Rowan A, Martinez P, Swanton C
Citation(s) 23716380
Submission date May 18, 2013
Last update date Nov 27, 2018
Contact name Pierre Martinez
Organization name Cancer Research Centre of Lyon
Street address 28 rue Laennec
City Lyon cedex 08
ZIP/Postal code 69373
Country France
Platforms (1)
GPL6801 [GenomeWideSNP_6] Affymetrix Genome-Wide Human SNP 6.0 Array
Samples (71)
GSM1144436 Normal kidney P5
GSM1144437 Primary tumour region 1 P5
GSM1144438 Primary tumour region 2 P5
BioProject PRJNA203550

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE47077_RAW.tar 1.9 Gb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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