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Series GSE47033 Query DataSets for GSE47033
Status Public on Mar 25, 2014
Title RNA-seq in whole mouse embryos at stage E10.5
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary An increasing number of studies, including mutant expression profiling and comparative transcriptomic analyses, require reference RNA-seq data collections in mice. Particularly, to complement previous profiling data sets based on arrays, a full RNA-seq developmental series will be required for whole embryos. E10.5 is a key reference stage as it represents the early organogenesis stage. Here, we have performed high-throughput sequencing of total RNA form whole mice embryos at embryonic stage E10.5.
Overall design Sequencing of the total RNA of whole embryos of mouse at embryonic stage E10.5.
Contributor(s) Tena JJ, González-Aguilera C, Fernández-Miñán A, Parra-Acero H, Cross JW, Carvajal JJ, Wittbrodt J, Gómez-Skarmeta JL, Martínez-Morales JR
Citation(s) 24709821
Submission date May 16, 2013
Last update date May 15, 2019
Contact name Juan J. Tena
Organization name CABD/CSIC
Street address Univ. Pablo Olavide, Ctra. Utrera km1
City Sevilla
ZIP/Postal code 41013
Country Spain
Platforms (1)
GPL13112 Illumina HiSeq 2000 (Mus musculus)
Samples (2)
GSM1143424 RNAseq_E10.5_rep1
GSM1143425 RNAseq_E10.5_rep2
BioProject PRJNA203332
SRA SRP022861

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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE47033_RAW.tar 1.5 Mb (http)(custom) TAR (of RPKM)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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