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GEO help: Mouse over screen elements for information. |
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| Status |
Public on Mar 25, 2014 |
| Title |
RNA-seq in whole mouse embryos at stage E10.5 |
| Organism |
Mus musculus |
| Experiment type |
Expression profiling by high throughput sequencing
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| Summary |
An increasing number of studies, including mutant expression profiling and comparative transcriptomic analyses, require reference RNA-seq data collections in mice. Particularly, to complement previous profiling data sets based on arrays, a full RNA-seq developmental series will be required for whole embryos. E10.5 is a key reference stage as it represents the early organogenesis stage. Here, we have performed high-throughput sequencing of total RNA form whole mice embryos at embryonic stage E10.5.
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| Overall design |
Sequencing of the total RNA of whole embryos of mouse at embryonic stage E10.5.
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| Contributor(s) |
Tena JJ, González-Aguilera C, Fernández-Miñán A, Parra-Acero H, Cross JW, Carvajal JJ, Wittbrodt J, Gómez-Skarmeta JL, Martínez-Morales JR |
| Citation(s) |
24709821 |
| Submission date |
May 16, 2013 |
| Last update date |
May 15, 2019 |
| Contact name |
Juan J. Tena |
| E-mail(s) |
jjtenagu@upo.es
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| Organization name |
CABD/CSIC
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| Street address |
Univ. Pablo Olavide, Ctra. Utrera km1
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| City |
Sevilla |
| ZIP/Postal code |
41013 |
| Country |
Spain |
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| Platforms (1) |
| GPL13112 |
Illumina HiSeq 2000 (Mus musculus) |
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| Samples (2) |
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| Relations |
| BioProject |
PRJNA203332 |
| SRA |
SRP022861 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE47033_RAW.tar |
1.5 Mb |
(http)(custom) |
TAR (of RPKM) |
SRA Run Selector |
| Raw data are available in SRA |
| Processed data provided as supplementary file |
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