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Series GSE46848 Query DataSets for GSE46848
Status Public on Mar 28, 2014
Title The distribution of genomic variations in human iPSCs is related to replication timing reorganization during reprogramming
Organism Homo sapiens
Experiment type Expression profiling by array
Genome variation profiling by SNP array
Genome variation profiling by genome tiling array
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Contributor(s) Li H, Lu J
Citation(s) 24685138
Submission date May 11, 2013
Last update date Mar 25, 2019
Contact name Hu Li
E-mail(s) li.hu@mayo.edu
Organization name Mayo Clinic
Department Molecular Pharmacology & Experimental Therapeutics
Lab Systems Biology and Pharmacology
Street address 200 First Street, Gonda Building G19-408
City Rochester
State/province MN
ZIP/Postal code 55904
Country USA
 
Platforms (3)
GPL570 [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array
GPL6801 [GenomeWideSNP_6] Affymetrix Genome-Wide Human SNP 6.0 Array
GPL18318 NimbleGen Human 6x630K CGH Whole Genome tiling array [100710_HG19_WG_CGH_PERF_UX6]
Samples (17)
GSM1139123 hFib2-1 [genex]
GSM1139124 hFib2-2 [genex]
GSM1139133 H2-1-p9-1 [genex]
This SuperSeries is composed of the following SubSeries:
GSE55395 The distribution of genomic variations in human iPSCs is related to replication timing reorganization during reprogramming [Affymetrix]
GSE55397 The distribution of genomic variations in human iPSCs is related to replication timing reorganization during reprogramming [NimbleGen]
Relations
BioProject PRJNA202995

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE46848_RAW.tar 715.5 Mb (http)(custom) TAR (of CEL, CNCHP, PAIR)
Raw data provided as supplementary file
Processed data included within Sample table
Processed data provided as supplementary file
Processed data are available on Series record

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