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Series GSE46566 Query DataSets for GSE46566
Status Public on Feb 17, 2014
Title Mouse spleen: Histone modification patterns in spleens from wild type and leukemic mice
Organism Mus musculus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary ChIP-Seq for H3K4me3 and H3K27me3 in wild type spleens and spleens from mice having deletion of RBP-J in cells of the renin lineage, which results in B-cell leukemia.
Overall design Examination of 2 different histone modifications in wild type and mutant spleens.
Contributor(s) Gomez RA, Pentz ES, Belyea B, Sequeira-Lopez ML
Citation(s) 24549417
Submission date May 01, 2013
Last update date May 15, 2019
Contact name R. Ariel Gomez
Phone 434-924-2525
Fax 434-982-4328
Organization name University of Virginia
Department Pediatrics
Lab Gomez
Street address 409 Lane Rd. MR-4 2001
City Charlottesville
State/province VA
ZIP/Postal code 22908
Country USA
Platforms (1)
GPL13112 Illumina HiSeq 2000 (Mus musculus)
Samples (5)
GSM1132536 WT_H3K27me3_ChIPSeq
GSM1132537 MU_H3K27me3_ChIPSeq
GSM1132538 WT_H3K4me3_ChIPSeq
BioProject PRJNA200974
SRA SRP022030

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE46566_RAW.tar 473.6 Mb (http)(custom) TAR (of BAR, BEDGRAPH)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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