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Series GSE45909 Query DataSets for GSE45909
Status Public on Mar 28, 2014
Title Transcriptome analysis of mouse embryonic stem cells treated with MS-275
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary This study describes transcriptome profiling of mouse ES cells treated with MS-275. We included RNA-Seq of ds_cDNA synthesized from double poly(A) selected mRNA
Overall design RNA-Seq profiling on mouse ES cells treated with MS-275
Contributor(s) Franci G, Stunnenberg HG, Altucci L, Menafra R
Citation(s) 24167717
Submission date Apr 09, 2013
Last update date May 15, 2019
Contact name H.G. Stunnenberg
Phone +31-24-3610520
Organization name Radboud University
Department Department of Molecular Biology (274)
Street address Geert Grooteplein 28
City Nijmegen
ZIP/Postal code 6525 GA
Country USA
Platforms (1)
GPL11002 Illumina Genome Analyzer IIx (Mus musculus)
Samples (4)
GSM1119383 Solvent_24h
GSM1119384 Solvent_24h_Duplicate
GSM1119385 MS275_5_24h
BioProject PRJNA196631
SRA SRP020658

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE45909_MS275_5_24h_Duplicate_CUT_0.001_imputed_Ratio.txt.gz 297.8 Kb (ftp)(http) TXT
GSE45909_MS275_5_OLD_CUT_0.001_imputed.txt.gz 306.7 Kb (ftp)(http) TXT
GSE45909_RAW.tar 242.7 Mb (http)(custom) TAR (of BED, TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file
Processed data are available on Series record

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