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Series GSE45615 Query DataSets for GSE45615
Status Public on Nov 22, 2013
Title Expression analysis of HCT116 cells transfected using Tip60 or p400-targetting siRNA
Organism Homo sapiens
Experiment type Expression profiling by genome tiling array
Summary Investigation of whole genome gene expression level changes in HCT116 cells upon knockdown of Tip60 or p400, compared to control siRNA-transfected cells.
Two different siRNA directed against Tip60 were used and experiments were done in duplicate. Same for p400-targetting or control siRNA.
 
Overall design Hybridization experiment using total RNA recovered from independent cell cultures of HCT116 transfected using control, Tip60-targetting or p400-targetting siRNA.
 
Contributor(s) Escaffit F, Chevillard-Briet M, Quaranta M
Citation(s) 24287617
Submission date Mar 28, 2013
Last update date Jan 09, 2014
Contact name Fabrice ESCAFFIT
E-mail(s) fabrice.escaffit@univ-tlse3.fr
Organization name CNRS
Department LBCMCP UMR5088
Lab Chromatin and Cell Proliferation
Street address 118, route de Narbonne
City TOULOUSE Cedex 9
ZIP/Postal code 31062
Country France
 
Platforms (1)
GPL10191 NimbleGen Homo sapiens HG18 090828 opt expr HX12 (12x135k)
Samples (12)
GSM1110775 HCT116_Control-1_A
GSM1110776 HCT116_Control-1_B
GSM1110777 HCT116_Control-2_A
This SubSeries is part of SuperSeries:
GSE45616 p400 binding and Tip60/p400 gene expression regulation in HCT116 cells
Relations
BioProject PRJNA195403

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE45615_RAW.tar 40.1 Mb (http)(custom) TAR (of PAIR)
Processed data included within Sample table

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