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Series GSE45420 Query DataSets for GSE45420
Status Public on May 21, 2013
Title DNAseq data from human ovarian carcinoma cell lines subjected to shRNA TRC1.0 library
Organism Homo sapiens
Experiment type Genome variation profiling by high throughput sequencing
Summary The hallmark of human cancer is heterogeneity, mirroring the complexity of genetic and epigenetic alterations acquired during oncogenesis. We extracted DNA of 14 cultured human ovarian carcinoma cell lines subjected to pooled shRNA screen using TRC 1.0 library, and performed DNAseq.
Overall design 14 ovarian carcinoma cell lines DNAseq data.
Contributor(s) Tan T, Miow Q, Huang R, Abdul Hadi LH, Thiery J, Mori S
Citation(s) 23666744
Submission date Mar 22, 2013
Last update date May 15, 2019
Contact name Tuan Zea Tan
Organization name National University of Singapore
Department Cancer Science Institute Singapore
Street address 14 Medical Drive, #11-01, Singapore
City Singapore
ZIP/Postal code 117599
Country Singapore
Platforms (1)
GPL10999 Illumina Genome Analyzer IIx (Homo sapiens)
Samples (23)
GSM1104019 A2780J
GSM1104020 CH1
GSM1104021 SKOV4
BioProject PRJNA193675
SRA SRP019937

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Supplementary file Size Download File type/resource
GSE45420_OvCL.shRNA.TRC1.0.txt.gz 1.3 Mb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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