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Series GSE45418 Query DataSets for GSE45418
Status Public on Apr 28, 2013
Title The interactome of Pou5f1 enhancer in mouse embryonic stem cells
Organism Mus musculus
Experiment type Other
Summary We report the application of enyzme-based 4C-Seq technique for exploring Pou5f1 enhancer interactome in mouse ES cells.
Overall design We explored the interactome of Pou5f1 upstream enhancer in mouse ES cells by using an enzyme digestion based 4C-Seq protocol. The interactome is involved in gene active regulation.
Contributor(s) Wei Z, Gao F, Wang K, Lu W
Citation(s) 23705979, 23747203
Submission date Mar 22, 2013
Last update date May 15, 2019
Contact name Fan Gao
Organization name USC
Department ZNI
Street address 1501 San Pablo St. ZNI 245
City Los Angeles
State/province California
ZIP/Postal code 90033
Country USA
Platforms (1)
GPL13112 Illumina HiSeq 2000 (Mus musculus)
Samples (2)
GSM1103985 POU5F1_enzyme_replicate1_4C-Seq
GSM1103986 POU5F1_enzyme_replicate2_4C-Seq
BioProject PRJNA193670
SRA SRP019935

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Supplementary file Size Download File type/resource
GSE45418_RAW.tar 10.0 Kb (http)(custom) TAR (of BED)
GSE45418_enzyme_4C_sites_reproducible_regions.bed.gz 12.7 Kb (ftp)(http) BED
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Processed data are available on Series record
Raw data are available in SRA
Processed data provided as supplementary file

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