GEO Publications
Handout
NAR 2024 (latest)
NAR 2002 (original)
All publications
FAQ
MIAME
Email GEO
NCBI
>
GEO
>
Accession Display
Not logged in |
Login
GEO help:
Mouse over screen elements for information.
Scope:
Self
Platform
Samples
Series
Family
Format:
HTML
SOFT
MINiML
Amount:
Brief
Quick
GEO accession:
Series GSE44868
Query DataSets for GSE44868
Status
Public on Jul 09, 2013
Title
Genomic targets, and histone acetylation and gene expression profiling of neural HDAC inhibition
Organism
Mus musculus
Experiment type
Expression profiling by array
Genome binding/occupancy profiling by high throughput sequencing
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation(s)
23821663
Submission date
Mar 05, 2013
Last update date
Sep 16, 2019
Contact name
Angel Barco
Organization name
Instituto de Neurociencias (UMH-CSIC)
Street address
Av. Santiago Ramón y Cajal
City
Sant Joan d'Alacant
State/province
Alicante
ZIP/Postal code
03550
Country
Spain
Platforms (3)
GPL6246
[MoGene-1_0-st] Affymetrix Mouse Gene 1.0 ST Array [transcript (gene) version]
GPL9250
Illumina Genome Analyzer II (Mus musculus)
GPL13112
Illumina HiSeq 2000 (Mus musculus)
Samples (43)
Less...
More...
GSM1055642
Wild-type Standard Cage Naïve Rep1
GSM1055643
Wild-type Standard Cage Naïve Rep2
GSM1055644
Wild-type Standard Cage Vehicle Rep3
GSM1055645
Wild-type Standard Cage Vehicle Rep4
GSM1055646
Wild-type Standard Cage Vehicle Rep5
GSM1055647
Wild-type Standard Cage TSA Rep1
GSM1055648
Wild-type Standard Cage TSA Rep2
GSM1055649
Wild-type Standard Cage TSA Rep3
GSM1055650
Wild-type Novelty Vehicle Rep1
GSM1055651
Wild-type Novelty Vehicle Rep2
GSM1055652
Wild-type Novelty Vehicle Rep3
GSM1055653
Wild-type Novelty TSA Rep1
GSM1055654
Wild-type Novelty TSA Rep2
GSM1055655
Wild-type Novelty TSA Rep3
GSM1062428
GBD1_Veh_AcH2B_ChIPseq
GSM1062429
GBD3_Veh_AcH2B_ChIPseq
GSM1062430
GBD5_TSA_AcH2B_ChIPseq
GSM1062431
GBD9_naïve_AcH2B_ChIPseq
GSM1062432
GBD22_naïve_AcH2B_ChIPseq
GSM1062433
GBD12_naïve_AcH3K9,14_ChIPseq
GSM1062434
GBD28_naïve_AcH3K9,14_ChIPseq
GSM1062435
GBD18_Veh_AcH3K9,14_ChIPseq
GSM1062436
GBD19_TSA_AcH3K9,14_ChIPseq
GSM1062437
GBD30_naïve_AcH4K12_ChIPseq
GSM1062438
GBD20_Veh_AcH4K12_ChIPseq
GSM1062439
GBD21_TSA_AcH4K12_ChIPseq
GSM1062440
GBD26_naïve_H3K4me3_ChIPseq
GSM1062441
GBD11_Input_Veh
GSM1062442
GBD24_IgG_naïve
GSM1093062
cbp+/- Standard Cage Naïve Rep1
GSM1093063
cbp+/- Standard Cage Naïve Rep2
GSM1093064
cbp+/- Standard Cage Vehicle Rep3
GSM1093065
cbp+/- Standard Cage Vehicle Rep4
GSM1093066
cbp+/- Standard Cage Vehicle Rep5
GSM1093067
cbp+/- Standard Cage TSA Rep1
GSM1093068
cbp+/- Standard Cage TSA Rep2
GSM1093069
cbp+/- Standard Cage TSA Rep3
GSM1093070
cbp+/- Novelty Vehicle Rep1
GSM1093071
cbp+/- Novelty Vehicle Rep2
GSM1093072
cbp+/- Novelty Vehicle Rep3
GSM1093073
cbp+/- Novelty TSA Rep1
GSM1093074
cbp+/- Novelty TSA Rep2
GSM1093075
cbp+/- Novelty TSA Rep3
This SuperSeries is composed of the following SubSeries:
GSE43051
Gene expression profiling of neural HDAC inhibition
GSE43439
Genomic topography of HDACi-induced hyperacetylation of hippocampal chromatin [ChIP-Seq]
Relations
BioProject
PRJNA192435
Download family
Format
SOFT formatted family file(s)
SOFT
MINiML formatted family file(s)
MINiML
Series Matrix File(s)
TXT
Supplementary file
Size
Download
File type/resource
GSE44868_RAW.tar
275.1 Mb
(http)
(custom)
TAR (of CEL, WIG)
SRA Run Selector
|
NLM
|
NIH
|
GEO Help
|
Disclaimer
|
Accessibility
|
Less...
More...