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Series GSE44837 Query DataSets for GSE44837
Status Public on Jul 12, 2013
Title Gene methylation profile of breast cancer cells.
Organism Homo sapiens
Experiment type Methylation profiling by genome tiling array
Summary We compared the gene methylation profile of 26 breast cancer cell lines to identify variations associated with different phenotypes and molecular subtype. The panel includes 13 estrogen receptor negative (ER-) and 13 ER+ cell lines. Four of the ER- cell lines and 5 of the ER+ cell lines are HER2 positive.
Overall design Bisulphite converted DNA from the 26 samples was hybridised to the Illumina Infinium Human Methylation450 Beadchip.
Contributor(s) Zahnow CA, Li H, Di Cello F
Citation(s) 23844228
Submission date Mar 04, 2013
Last update date Mar 22, 2019
Contact name Francescopaolo Di Cello
Organization name The Johns Hopkin University School of Medicine
Street address 1650 Orleans Street
City Baltimore
State/province MD
ZIP/Postal code 21287
Country USA
Platforms (1)
GPL13534 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482)
Samples (26)
GSM1092267 BT-20_day3_methyl
GSM1092268 BT-474_day3_methyl
GSM1092269 CAMA1_day3_methyl
This SubSeries is part of SuperSeries:
GSE44838 Gene expression and methylation profile of breast cancer cells.
BioProject PRJNA192572

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE44837_RAW.tar 183.1 Mb (http)(custom) TAR
GSE44837_matrix_signal_intensities.txt.gz 61.6 Mb (ftp)(http) TXT
Processed data included within Sample table

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