|
| Status |
Public on Jul 12, 2013 |
| Title |
Gene methylation profile of breast cancer cells. |
| Organism |
Homo sapiens |
| Experiment type |
Methylation profiling by genome tiling array
|
| Summary |
We compared the gene methylation profile of 26 breast cancer cell lines to identify variations associated with different phenotypes and molecular subtype. The panel includes 13 estrogen receptor negative (ER-) and 13 ER+ cell lines. Four of the ER- cell lines and 5 of the ER+ cell lines are HER2 positive.
|
| |
|
| Overall design |
Bisulphite converted DNA from the 26 samples was hybridised to the Illumina Infinium Human Methylation450 Beadchip.
|
| |
|
| Contributor(s) |
Zahnow CA, Li H, Di Cello F |
| Citation(s) |
23844228 |
| Submission date |
Mar 04, 2013 |
| Last update date |
Mar 22, 2019 |
| Contact name |
Francescopaolo Di Cello |
| E-mail(s) |
fdicello@hotmail.com
|
| Organization name |
The Johns Hopkin University School of Medicine
|
| Street address |
1650 Orleans Street
|
| City |
Baltimore |
| State/province |
MD |
| ZIP/Postal code |
21287 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL13534 |
Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482) |
|
| Samples (26)
|
|
| This SubSeries is part of SuperSeries: |
| GSE44838 |
Gene expression and methylation profile of breast cancer cells. |
|
| Relations |
| BioProject |
PRJNA192572 |
Less...
More...