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Series GSE44586 Query DataSets for GSE44586
Status Public on Jul 17, 2013
Title Genome-wide nucleosome, TFIIIC and TFIIIB occupancies in Saccharomyces cerevisiae
Organism Saccharomyces cerevisiae
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary Paired-end sequencing study of nucleosomes and immuno-precipitated Tfc1 and Brf1 complexes from MNase-digested nuclei.
Overall design Nucleosomal DNA, input DNA and DNA from immunopurified TFIIIB and TFIIIC complexes (IP) were subjected to paired-end sequencing.
Contributor(s) Nagarajavel V, Clark DJ
Citation(s) 23856458
Submission date Feb 22, 2013
Last update date May 15, 2019
Contact name Nagarajavel Vivekananthan
Organization name National Institutes of Health
Department NICHD
Street address 9500 Rockville Pike, Buld 6A/Rm 2A14
City Bethesda
State/province Maryland
ZIP/Postal code 20892
Country USA
Platforms (2)
GPL9377 Illumina Genome Analyzer II (Saccharomyces cerevisiae)
GPL13821 Illumina HiSeq 2000 (Saccharomyces cerevisiae)
Samples (12)
GSM1087269 Wild type - nucleosomes
GSM1087270 Wild type -nucleosomes - Repeat
GSM1087271 control - Input
BioProject PRJNA190112
SRA SRP018819

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Supplementary file Size Download File type/resource
GSE44586_RAW.tar 286.9 Mb (http)(custom) TAR (of BW)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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