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Status |
Public on Feb 12, 2013 |
Title |
Redistribution of H3K27me3 upon DNA hypomethylation results in de-repression of polycomb-target genes |
Organism |
Mus musculus |
Experiment type |
Expression profiling by array Genome binding/occupancy profiling by genome tiling array Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing
|
Summary |
This SuperSeries is composed of the SubSeries listed below.
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Overall design |
Refer to individual Series
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|
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Citation(s) |
23531360 |
Submission date |
Feb 12, 2013 |
Last update date |
May 15, 2019 |
Contact name |
James P Reddington |
Organization name |
EMBL
|
Street address |
Meyerhofstrasse 1
|
City |
Heidelberg |
ZIP/Postal code |
69115 Heidelberg |
Country |
Germany |
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Platforms (6)
|
GPL6885 |
Illumina MouseRef-8 v2.0 expression beadchip |
GPL6887 |
Illumina MouseWG-6 v2.0 expression beadchip |
GPL9250 |
Illumina Genome Analyzer II (Mus musculus) |
GPL11002 |
Illumina Genome Analyzer IIx (Mus musculus) |
GPL13112 |
Illumina HiSeq 2000 (Mus musculus) |
GPL16605 |
NimbleGen_MM9_3x720K_Refseq_Promoter [090618_MM9_Refseq_Prom_ChIP] |
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Samples (35)
|
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This SuperSeries is composed of the following SubSeries:
|
GSE44149 |
Chip-chip for H3K27me3 and H3K4me3 in DNA methylation deficient mouse embryonic fibroblasts |
GSE44276 |
Comparison of gene expression in Dnmt1+/+ MEFs treated with 5-aza-2'-deoxycytidine or vector control |
GSE44277 |
Comparison of gene expression in Dnmt1+/+ and Dnmt1-/- MEFs |
GSE44393 |
Chip-seq for H3K27me3 and H3K4me3 in DNA methylation deficient mouse embryonic fibroblasts |
GSE44733 |
mRNA-seq in DNA methylation deficient mouse embryonic fibroblasts |
GSE44757 |
DNA methylation profiling by HELP-seq in Dnmt1+/+ mouse embryonic fibroblasts |
GSE44760 |
Reduced Representation Bisulfite Sequencing in DNA methylation deficient mouse embryonic fibroblasts |
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Relations |
BioProject |
PRJNA189279 |