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Series GSE44086 Query DataSets for GSE44086
Status Public on Dec 31, 2015
Title Mapping N6-methyladenosine methylome in mouse embryonic stem cells
Organism Mus musculus
Experiment type Other
Summary m6A-seq of undifferentiated and differentiated mouse embryonic stem cell
Overall design m6A-mRNA library for undifferentiated and differentiated mouse embryonic stem cell each having one biological replicate were generated using HiSeq2000 v3 flowcell (Illumina) and sequenced for 100 bases with separate 7 base indexing read in a single lane.
Contributor(s) Li Y, Wang Y, Zhang Z, Ordoukhanian P, Head SR, Liu Q, Zhao JC
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Submission date Feb 05, 2013
Last update date May 15, 2019
Contact name Yue Li
Organization name Massachusetts Institute of Technology
Street address 32 Vassar Street, 32-D528
City Cambridge
State/province Massachusetts
ZIP/Postal code 02139
Country USA
Platforms (1)
GPL13112 Illumina HiSeq 2000 (Mus musculus)
Samples (12)
GSM1078158 YW1 Input RNA
GSM1078159 YW2 m6A-seq
GSM1078160 YW3 Input RNA
BioProject PRJNA188519
SRA SRP018409

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE44086_RAW.tar 242.1 Mb (http)(custom) TAR (of BEDGRAPH)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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