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Series GSE43873 Query DataSets for GSE43873
Status Public on Sep 17, 2013
Title Focal Adhesion Kinase Dependent Expression
Organism Mus musculus
Experiment type Expression profiling by array
Summary The goal of this study was to identify transcripts, which are differentially regulatulated in the presence and absence of Focal Adhesion Kinase. As Focal Adhesion Kinase activity can depend upon cell density (Snijder et al. Nature 2009), biological replicates where cells, were seeded very sparsely or confluently, were used.
Overall design Focal Adhesion Kinase Knockout (ATCC CRL-2644) and Rescue Cells (Sieg et al. 1998, clone DA2) were seeded at two different concentrations. Replicas refer to biological replicates, performed on different days. Only one single technical replicate has been done per biological replicate.
Contributor(s) Stoeger T, Snijder B, Patrignani A
Citation(s) 24097268
Submission date Jan 29, 2013
Last update date Jan 12, 2017
Contact name Berend Snijder
Organization name University of Zurich
Department IMLS
Lab Pelkmans Lab
Street address Winterthurerstrasse 190
City Zurich
ZIP/Postal code CH-8057
Country Switzerland
Platforms (1)
GPL7202 Agilent-014868 Whole Mouse Genome Microarray 4x44K G4122F (Probe Name version)
Samples (12)
GSM1072615 FAK Rescue, sparse, Experimental Day July9th
GSM1072616 FAK Rescue, dense, Experimental Day July9th
GSM1072617 FAK KO, sparse, Experimental Day July9th
BioProject PRJNA187977

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE43873_RAW.tar 26.2 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table

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