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Series GSE43763 Query DataSets for GSE43763
Status Public on Mar 18, 2013
Title EBF2 determines and maintains brown adipocyte identity
Organism Mus musculus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary We compared PPARg binding sites in BAT and eWAT to identify regulatory elements that contribute to BAT identity and to find an important factor that bind those elements. To this end, we performed PPARg ChIP-seq in both tissues and called each tissue-spsecific binding sites.
Overall design PPARg ChIP-seq in BAT and eWAT of mice
Contributor(s) Rajakumari S, Ishibashi J, Lim H, Won K, Seale P
Citation(s) 23499423
Submission date Jan 25, 2013
Last update date May 15, 2019
Contact name Hee-Woong Lim
Organization name Cincinnati Children's Hospital Medical Center
Department Division of Biomedical Informatics
Street address 3333 Burnet Ave. MLC 7024
City Cincinnati
State/province Ohio
ZIP/Postal code 45229
Country USA
Platforms (2)
GPL11002 Illumina Genome Analyzer IIx (Mus musculus)
GPL13112 Illumina HiSeq 2000 (Mus musculus)
Samples (2)
GSM1070476 BAT_PPARg
GSM1070477 eWAT_PPARg
BioProject PRJNA187365
SRA SRP018214

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE43763_RAW.tar 110.0 Kb (http)(custom) TAR (of BED)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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