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Series GSE43091 Query DataSets for GSE43091
Status Public on Dec 18, 2013
Title Genome-scale methylome profiling of hepatocellular adenomas.
Organism Homo sapiens
Experiment type Methylation profiling by genome tiling array
Summary Genome-scale DNA methylation was analyzed in a cohort of 50 hepatocellular adenomas and 4 normal liver tissues. We performed consensus clustering to identify homogeneous tumor clusters, and we characterized DNA methylation changes in tumor subgroups.
Overall design Bisulfite converted DNA from 50 fresh frozen hepatocellular adenomas and 4 normal liver samples were hybridized to Illumina HumanMethylation450 BeadChips.
Contributor(s) Letouzé E, Pilati C, Imbeaud S, Zucman-Rossi J
Citation(s) 24735922
Submission date Dec 20, 2012
Last update date Mar 22, 2019
Contact name Eric Letouzé
Organization name Ligue Contre Le Cancer
Lab Centre de Recherche des Cordeliers
Street address 15 rue de l'école de médecine
City Paris
ZIP/Postal code 75006
Country France
Platforms (1)
GPL13534 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482)
Samples (54)
GSM1056334 CHC591N
GSM1056335 CHC566N
GSM1056336 CHC934N
This SubSeries is part of SuperSeries:
GSE43273 Genome-scale methylome and SNP profiling of hepatocellular adenomas and carcinomas
BioProject PRJNA185183

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE43091_RAW.tar 183.1 Mb (http)(custom) TAR
GSE43091_methylated_unmethylated_signal.txt.gz 113.1 Mb (ftp)(http) TXT
Processed data included within Sample table

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