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Series GSE42882 Query DataSets for GSE42882
Status Public on Jan 10, 2013
Title DNA methylation in the malignant transformation of meningiomas
Organism Homo sapiens
Experiment type Methylation profiling by genome tiling array
Summary Genome wide DNA methylation profiling of malignant, atypical and benign meningiomas samples. The Illumina infinium HumanMethylation450 beadchip kit was used, which assayed 450,000 potential methylation sites.
Overall design Bisulphite converted DNA from the 23 samples were hybridised to the Illumina Infinium 450 Human Methylation Beadchip.
Contributor(s) Gao F, Wang K
Citation(s) 23349797
Submission date Dec 12, 2012
Last update date Jun 14, 2021
Contact name Fan Gao
Organization name USC
Department ZNI
Street address 1501 San Pablo St. ZNI 245
City Los Angeles
State/province California
ZIP/Postal code 90033
Country USA
Platforms (1)
GPL13534 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482)
Samples (23)
GSM1052711 meningiomas_010
GSM1052712 meningiomas_048
GSM1052713 meningiomas_176
BioProject PRJNA183698

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE42882_RAW.tar 183.1 Mb (http)(custom) TAR
GSE42882_methylated_intensity.txt.gz 52.3 Mb (ftp)(http) TXT
GSE42882_p-values.txt.gz 2.8 Mb (ftp)(http) TXT
GSE42882_uncorrected_beta_values.txt.gz 55.3 Mb (ftp)(http) TXT
GSE42882_unmethylated_intensity.txt.gz 53.1 Mb (ftp)(http) TXT
Processed data included within Sample table
Processed data are available on Series record

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