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Series GSE42777 Query DataSets for GSE42777
Status Public on Aug 13, 2013
Title Gene expression microarray analysis on the dentate gyrus of Schnurri-2 knockout and wild-type control mice
Organism Mus musculus
Experiment type Expression profiling by array
Summary Schnurri-2 (Shn-2), an NF-kappa B site-binding protein, tightly binds to the enhancers of major histocompatibility complex (MHC) class I genes and inflammatory cytokines, which have been shown to harbor common variant single nucleotide polymorphisms associated with schizophrenia. Shn-2 knockout mice show behavioral abnormalities that strongly resemble those of schizophrenics. We performed gene expression microarray analysis of dentate gyri from Shn-2 knockout and wild-type control mice.
 
Overall design Dentate gyrus RNA isolated from six Shn-2 knockout and six control wild-type mice were compared.
 
Contributor(s) Takao K, Umemori J
Citation(s) 23389689
Submission date Dec 06, 2012
Last update date Feb 11, 2019
Contact name Juzoh Umemori
E-mail(s) jumemori@fujita-hu.ac.jp
Organization name Fujita Health University
Street address 1-98 Kutsukakecho, Dengakugakubo
City Toyoake
ZIP/Postal code 470-1192
Country Japan
 
Platforms (1)
GPL1261 [Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array
Samples (12)
GSM1049775 Control DG, biological rep1
GSM1049776 Mutant DG, biological rep1
GSM1049777 Control DG, biological rep2
This SubSeries is part of SuperSeries:
GSE42778 Gene expression microarray analysis on the medial prefrontal cortex and dentate gyrus of Schnurri-2 knockout and wild-type control mice
Relations
BioProject PRJNA183119

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE42777_RAW.tar 39.7 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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