|
| Status |
Public on Jan 01, 2014 |
| Title |
Analysis of genome-wide copy number variations in Oryza sativa L. |
| Platform organism |
Oryza sativa |
| Sample organisms |
Oryza sativa Indica Group; Oryza sativa Japonica Group |
| Experiment type |
Genome variation profiling by genome tiling array
|
| Summary |
We describe a more detailed survey undertaken to detect candidate CNVs in a panel of 20 Asian cultivated rice and the genome-wide characteristics of CNVs in subspecies and groups.
These resources allowed us to analyze genetic structure as indicated by CNVs, to implicate the biological roles of CNVs, and to identify candidate CNVs that are likely to occur independently in groups and contribute to differences between the subspecies.
|
| |
|
| Overall design |
a panel of 20 accessions
|
| |
|
| Contributor(s) |
Yu P, Wei X |
| Citation(s) |
24059626 |
| |
| Submission date |
Dec 06, 2012 |
| Last update date |
Apr 21, 2014 |
| Contact name |
Ping Yu |
| E-mail(s) |
pingping367@163.com
|
| Organization name |
China National Rice Research Institute
|
| Street address |
359 Tiyuchang Road
|
| City |
Hangzhou |
| ZIP/Postal code |
310006 |
| Country |
China |
| |
|
| Platforms (1) |
| GPL13842 |
NimbleGen Rice CGH 3x720K Whole-Genome Tiling Arrays [100816_CB_Osat_NCBI_CGH] |
|
| Samples (21)
|
|
| Relations |
| BioProject |
PRJNA183091 |
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