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Series GSE42752 Query DataSets for GSE42752
Status Public on Dec 06, 2012
Title Epigenetic analysis of normal colon epithelium and colon adenocarcinoma
Organism Homo sapiens
Experiment type Methylation profiling by genome tiling array
Summary Genome-wide DNA methylation profiles were obtained from colon adenocarcinoma samples (22), corresponding normal colon tissue (22) and cancer-unrelated normal colon tissue using Illumina HumanMethylation450 BeadChips. Approximately 485000 CpG sites were measured in every sample.
 
Overall design Bisulphite-converted DNA from the 63 samples were hybridised to the Illumina HumanMethylation450 BeadChip.
 
Contributor(s) Naumov VA, Generozov EV
Citation(s) 23867710
Submission date Dec 05, 2012
Last update date Mar 22, 2019
Contact name Vladimir Naumov
E-mail(s) vnaumov@niifhm.ru
Phone 0079156727733
Organization name Research Institute of Physico-Chemical Medicine
Department Molecular Biology
Lab Human Genetics
Street address Malaya Pirogovskaya 1a
City Moscow
ZIP/Postal code 119435
Country Russia
 
Platforms (1)
GPL13534 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482)
Samples (63)
GSM1049367 Genomic DNA from colon biopsy 1
GSM1049368 Genomic DNA from colon biopsy 2
GSM1049369 Genomic DNA from colon biopsy 3
Relations
BioProject PRJNA183009

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE42752_RAW.tar 183.1 Mb (http)(custom) TAR
GSE42752_methylated_unmethylated_signals.txt.gz 286.1 Mb (ftp)(http) TXT
Processed data included within Sample table
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