|
| Status |
Public on Sep 30, 2013 |
| Title |
Genomewide analysis of U1C-dependent alternative splicing |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
To investigate whether U1C plays a role in splicing regulation in human system, we performed siRNA-mediated knockdown of U1C in HeLa cells and analyzed alternative splicing patterns by high-throughput RNA sequencing (RNAseq)
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| |
|
| Overall design |
RNAseq performed with poly(A)+ selected total RNA from U1C-knockdown and control-treated HeLa cells
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| |
|
| Contributor(s) |
Bindereif A, Hung L |
| Citation(s) |
24146627 |
| |
| Submission date |
Nov 23, 2012 |
| Last update date |
May 15, 2019 |
| Contact name |
Lee-Hsueh Hung |
| E-mail(s) |
Lee-Hsueh.Hung@chemie.bio.uni-giessen.de
|
| Phone |
0049-641-9935421
|
| Organization name |
University of Giessen
|
| Department |
Biochemistry
|
| Street address |
Heinrich-Buff-Ring 58
|
| City |
Giessen |
| State/province |
Hessen |
| ZIP/Postal code |
35392 |
| Country |
Germany |
| |
|
| Platforms (1) |
| GPL9115 |
Illumina Genome Analyzer II (Homo sapiens) |
|
| Samples (2) |
|
| Relations |
| BioProject |
PRJNA182113 |
| SRA |
SRP017294 |
