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Series GSE42443 Query DataSets for GSE42443
Status Public on Jan 20, 2013
Title Activation of the chromatin-remodeling factor Smarca4/Brg1 cooperates with Olig2 to establish oligodendrocyte identity and control CNS myelination [RNA-seq]
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Spinal cord mRNA profiles of 14-day-old control (Brg1c/+;Olig1-Cre) and Smarca4/Brg1 conditional knockout (Brg1c/c;Olig1-Cre) mice were generated by RNA-seq. Differential expressed genes are identified using Cuffdiff and validated with qPCR.
 
Overall design Spinal cord mRNA profiles of 14-day old control and Brg1c/c;Olig1-Cre mice were generated by RNA-sequencing.
 
Contributor(s) Lu QR, Yu Y, Chen Y
Citation(s) 23332759
Submission date Nov 21, 2012
Last update date May 15, 2019
Contact name Yang Yu
E-mail(s) yuyang_2007@yahoo.com
Organization name Si Chuan University
Street address Ren Min Nan road
City Chengdu
State/province Si Chuan
ZIP/Postal code 610041
Country China
 
Platforms (1)
GPL13112 Illumina HiSeq 2000 (Mus musculus)
Samples (2)
GSM1040149 Ctrl_SC
GSM1040150 cKO_SC
This SubSeries is part of SuperSeries:
GSE42454 Activation of the chromatin-remodeling factor Smarca4/Brg1 cooperates with Olig2 to establish oligodendrocyte identity and control CNS myelination
Relations
BioProject PRJNA182001
SRA SRP017272

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Supplementary file Size Download File type/resource
GSE42443_Brg1cKO_gene_exp.diff.gz 829.6 Kb (ftp)(http) DIFF
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Raw data are available in SRA
Processed data are available on Series record

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