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Series GSE42268 Query DataSets for GSE42268
Status Public on Apr 04, 2013
Title Quartz-Seq: a simple and highly quantitative method for single-cell RNA-Seq
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary We report novel single-cell RNA-Seq, called Quartz-Seq. Quartz-Seq was simplified method compared with previous methods based on poly-A tailing reaction.
 
Overall design RNA-seq by illumina TruSeq, KAPA library preparation kit, single-cell Quartz-Seq and single-cell Smart-Seq by illumina HiSeq 2000/1000
Web link http://bit.accc.riken.jp/home/en/
 
Contributor(s) Sasagawa Y, NIKAIDO I, Ueda HR
Citation(s) 23594475
Submission date Nov 14, 2012
Last update date May 15, 2019
Contact name Itoshi NIKAIDO
E-mail(s) itoshi.nikaido@riken.jp
Organization name RIKEN
Department Center for Biosystems Dynamics Research
Lab Laboratory for Bioinformatics Research
Street address 2-1 Hirosawa
City Wako
State/province Saitama
ZIP/Postal code 351-0198
Country Japan
 
Platforms (2)
GPL13112 Illumina HiSeq 2000 (Mus musculus)
GPL15103 Illumina HiSeq 1000 (Mus musculus)
Samples (77)
GSM1036480 EB5K-01
GSM1036481 EB5K-02
GSM1036482 EB5T-01
Relations
BioProject PRJNA179507
SRA SRP017173

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE42268_RAW.tar 23.1 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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