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Series GSE42268 Query DataSets for GSE42268
Status Public on Apr 04, 2013
Title Quartz-Seq: a simple and highly quantitative method for single-cell RNA-Seq
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary We report novel single-cell RNA-Seq, called Quartz-Seq. Quartz-Seq was simplified method compared with previous methods based on poly-A tailing reaction.
Overall design RNA-seq by illumina TruSeq, KAPA library preparation kit, single-cell Quartz-Seq and single-cell Smart-Seq by illumina HiSeq 2000/1000
Web link
Contributor(s) Sasagawa Y, NIKAIDO I, Ueda HR
Citation(s) 23594475
Submission date Nov 14, 2012
Last update date May 15, 2019
Contact name Itoshi NIKAIDO
Organization name RIKEN
Department Center for Biosystems Dynamics Research
Lab Laboratory for Bioinformatics Research
Street address 2-1 Hirosawa
City Wako
State/province Saitama
ZIP/Postal code 351-0198
Country Japan
Platforms (2)
GPL13112 Illumina HiSeq 2000 (Mus musculus)
GPL15103 Illumina HiSeq 1000 (Mus musculus)
Samples (77)
GSM1036480 EB5K-01
GSM1036481 EB5K-02
GSM1036482 EB5T-01
BioProject PRJNA179507
SRA SRP017173

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE42268_RAW.tar 23.1 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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