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Series GSE42023 Query DataSets for GSE42023
Status Public on Nov 05, 2013
Title Genome wide expression profiling of anterior tongue cancer with no history of tobacco and alcohol use
Organism Homo sapiens
Experiment type Expression profiling by array
Summary We employed high-throughput gene expression profiling to understand gene expression differences between habits-associated tongue cancers and non-habits tongue cancers. Expression data from 22 tumors were used to identify a set of 18 differentially expressed genes that can, with high precision, distinguish the two etiologically diverse oral tumors. Results from the study provide insights into molecular carcinogenesis of tongue cancers without a history of tobacco and alcohol use.
 
Overall design We used RNA from 22 samples that included 10 tumor biopsies from habits-associated cancers and 12 from non-habits associated cancers.
 
Contributor(s) Pillai RM, Hariharan R, Babu JM
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Submission date Nov 05, 2012
Last update date Mar 20, 2017
Contact name Ramkumar Hariharan
E-mail(s) rmhariharan123@gmail.com
Organization name Rajiv Gandhi Center for Biotechnology
Department Cancer Research Program
Street address Poojapura, Thycaud PO
City Trivandrum
State/province Kerala
ZIP/Postal code 695014
Country India
 
Platforms (1)
GPL6883 Illumina HumanRef-8 v3.0 expression beadchip
Samples (22)
GSM1030752 Habits associated tongue tumor_YTY82T
GSM1030753 Habits associated tongue tumor_YTY84T
GSM1030754 Non-Habits associated tongue tumor_YTY88T
Relations
BioProject PRJNA178935

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE42023_RAW.tar 3.9 Mb (http)(custom) TAR
GSE42023_non_normalized.txt.gz 2.7 Mb (ftp)(http) TXT
Processed data included within Sample table
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