NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE41879 Query DataSets for GSE41879
Status Public on Mar 31, 2013
Title Gene expression analysis of murine SAMHD1 deficient peritoneal macrophages (S1056 to S1075)
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary To elucidate responses of myeloid cells to SAMHD1 deficiency in the absence of exogenous viral infection, we performed global gene expression analysis of SAMHD1 deficient macrophages.
 
Overall design Peritoneal macrophages from 10 mutants and 10 controls were FACS sorted. Isolated RNA was subjected to next generation mRNA sequencing.
 
Contributor(s) Behrendt R, Schumann T, Dahl A, Alexopoulou D
Citation(s) 23972988
Submission date Oct 26, 2012
Last update date May 15, 2019
Contact name Tina Schumann
E-mail(s) Tina.Schumann@tu-dresden.de
Organization name Institute of Immunology
Department Medical Faculty "Carl Gustav Carus"
Street address Fetscherstra├če 74
City Dresden
ZIP/Postal code 01307
Country Germany
 
Platforms (1)
GPL13112 Illumina HiSeq 2000 (Mus musculus)
Samples (20)
GSM1026888 WT macrophages (S1056 to S1075) #1
GSM1026889 WT macrophages (S1056 to S1075) #2
GSM1026890 WT macrophages (S1056 to S1075) #3
Relations
SRA SRP016859
BioProject PRJNA178602

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE41879_normalizedCounts.txt.gz 2.4 Mb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap