GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
Series GSE41689 Query DataSets for GSE41689
Status Public on Nov 01, 2014
Title Epigenome analysis of control and KLF4-overexpressing podocytes
Organism Homo sapiens
Experiment type Methylation profiling by array
Summary Genome wide DNA methylation profiling of control (vector-transfected) and KLF4-overexpressing human podocytes (parental cell line: Saleem et al. JASN 13:630, 2002). The Illumina HumanMethylation450 Beadchip was used to obtain DNA methylation profiles.
Overall design Bisulphite converted DNA samples from control (vector-transfected, n=1) and KLF4-overexpressing human podocytes (n=1) were hybridised to the Illumina HumanMethylation450 Beadchip and DNA methylation was compared.
Contributor(s) Hayashi K, Sasamura H
Citation(s) 24812666
Submission date Oct 18, 2012
Last update date Mar 22, 2019
Contact name Hiroyuki Sasamura
Organization name Keio University School of Medicine
Department Internal Medicine
Street address 35 Shinanomachi
City Shinjuku-ku
State/province Tokyo
ZIP/Postal code 160-8582
Country Japan
Platforms (1)
GPL13534 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482)
Samples (2)
GSM1022700 genomic DNA from human podocyte with empty control vector
GSM1022701 genomic DNA from human podocyte with KLF4 expression vector
BioProject PRJNA177934

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE41689_RAW.tar 183.1 Mb (http)(custom) TAR
GSE41689_signal_intensities.txt.gz 5.9 Mb (ftp)(http) TXT
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap