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Series GSE41399 Query DataSets for GSE41399
Status Public on Nov 10, 2012
Title Changes in histone modifications H3K4me2, H3k27me3 and H3K36me3 due to phenobarbital in mice
Organism Mus musculus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary 29-32 days old male mice where either treated with Phenobarbital or untreated
Overall design Replicated control/treated study with IP and Input per group and antibody
Contributor(s) Thomson JP, Lempiäinen H, Hackett J, Nestor CE, Müller A, Bolognani F, Oakeley E, Schübeler D, Terranova R, Rheinhardt D, Moggs JG, Meehan RR
Citation(s) 23034186, 25985418
Submission date Oct 05, 2012
Last update date Jun 10, 2019
Contact name John Paterson Thomson
Organization name University of Edinburgh
Department MRC Human Genetics Unit
Lab Meehan
Street address Crewe Road
City Edinburgh
ZIP/Postal code EH4 2XU
Country United Kingdom
Platforms (2)
GPL11002 Illumina Genome Analyzer IIx (Mus musculus)
GPL13112 Illumina HiSeq 2000 (Mus musculus)
Samples (24)
GSM1016419 A H3K36me3 vehicle donor1024
GSM1016420 A H3K36me3 phenobarbital donor2021
GSM1016421 A H3K36me3 phenobarbital donor2024
This SubSeries is part of SuperSeries:
GSE40540 IP of 5-hydroxymethylcytosine (5-hmC) and 5-methylcytosine (5-mC) enriched DNA fragments from control and PB treated mouse livers
SRA SRP016020
BioProject PRJNA179303

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE41399_RAW.tar 364.0 Mb (http)(custom) TAR (of BEDGRAPH)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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