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Series GSE41379 Query DataSets for GSE41379
Status Public on May 01, 2013
Title Single-cell DNA methylation analysis of epimutations in mouse liver cells.
Organism Mus musculus
Experiment type Methylation profiling by high throughput sequencing
Summary We report a single-cell DNA methylation analysis using BS-Seq, which reveals enrichment of demethylating epimutations in gene bodies and repeat regions.
Overall design Comparison of single cells vs. a reference cell pool from Mouse liver tissue using an Illumina HiSeq machine.
Contributor(s) Akman K, Gravina S
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Submission date Oct 05, 2012
Last update date May 15, 2019
Contact name Kemal Akman
Phone +492215062161
Fax +492215062163
Organization name Max Planck Institute Cologne
Department Plant Breeding Research
Lab Tresch Group
Street address Carl-von-Linné-Weg 10
City Cologne
ZIP/Postal code 50829
Country Germany
Platforms (1)
GPL13112 Illumina HiSeq 2000 (Mus musculus)
Samples (5)
GSM1015968 Reference cell pool
GSM1015969 Single cell #1
GSM1015970 Single cell #2
SRA SRP016010
BioProject PRJNA176857

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE41379_RAW.tar 30.0 Kb (http)(custom) TAR (of GFF3)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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