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| Status |
Public on Aug 05, 2015 |
| Title |
High-throughput sequencing of mouse liver transcriptome. |
| Organism |
Mus musculus |
| Experiment type |
Expression profiling by high throughput sequencing
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| Summary |
Circadian profile of polyA RNA by RNA-Seq, collected from mouse liver at CT23, CT29, CT35, CT41, CT47, CT53, CT59, CT65. RNA from three livers pooled per time point.
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| Overall design |
8 wildtype samples with no replicates.
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| Contributor(s) |
Lahens NF, Hughes ME, Hong H, Grant GR, Gregory BD, Takahashi JS, Hogenesch JB |
| Citation missing |
Has this study been published? Please login to update or notify GEO. |
| Submission date |
Aug 17, 2012 |
| Last update date |
May 15, 2019 |
| Contact name |
Nicholas Lahens |
| Organization name |
University of Pennsylvania
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| Department |
ITMAT
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| Street address |
Smilow Center for Translational Research 10-110 3400 Civic Center Blvd, Bldg 421
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| City |
Philadelphia |
| State/province |
PA |
| ZIP/Postal code |
19104 |
| Country |
USA |
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| Platforms (1) |
| GPL11002 |
Illumina Genome Analyzer IIx (Mus musculus) |
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| Samples (8)
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| Relations |
| BioProject |
PRJNA173065 |
| SRA |
SRP014903 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE40190_RAW.tar |
543.8 Mb |
(http)(custom) |
TAR (of BED, BEDGRAPH, TXT) |
SRA Run Selector |
| Raw data are available in SRA |
| Processed data provided as supplementary file |
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