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Series GSE39275 Query DataSets for GSE39275
Status Public on Apr 03, 2013
Title tRNA fragment profiling in CLP1 mutant (kinase-dead) mice
Organism Mus musculus
Experiment type Non-coding RNA profiling by high throughput sequencing
Summary Loss of CLP1 activity results in the accumulation of novel sets of small RNA fragments derived from aberrant processing of tyrosine pre-tRNA. Such tRNA fragments sensitize cells to oxidative stress-induced p53 activation and p53-dependent cell death.
Overall design 2 samples, Wt and Clp1(k/k), no replicates
Contributor(s) Hanada T, Weitzer S, Martinez J
Citation(s) 23474986
Submission date Jul 11, 2012
Last update date May 15, 2019
Contact name Javier Martinez
Organization name IMBA
Street address Dr. Bohr-Gasse 3
City Vienna
ZIP/Postal code 1030
Country Austria
Platforms (1)
GPL13112 Illumina HiSeq 2000 (Mus musculus)
Samples (2)
GSM959617 Wild Type
GSM959618 Clp1(k/k)
BioProject PRJNA170450
SRA SRP014197

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE39275_RAW.tar 10.0 Kb (http)(custom) TAR (of TAB)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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