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Series GSE38858 Query DataSets for GSE38858
Status Public on Mar 08, 2013
Title AcceSssIble Assay to Study the Chomatin Accessibility and DNA Methylation
Organism Homo sapiens
Experiment type Methylation profiling by array
Expression profiling by array
Summary This SuperSeries is composed of the SubSeries listed below.
Overall design Refer to individual Series
Citation(s) 23408854
Submission date Jun 21, 2012
Last update date Mar 22, 2019
Contact name Kurinji Pandiyan
Organization name University of Southern California
Department Department of Urology - Norris Comprehensive Cancer Center
Street address 1441 Eastlake Avenue NOR 7344
City Los Angeles
ZIP/Postal code 90033
Country USA
Platforms (2)
GPL10904 Illumina HumanHT-12 V4.0 expression beadchip (gene symbol)
GPL13534 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482)
Samples (42)
GSM897809 HCT116_NoE_rep1
GSM897810 HCT116_SSS1_rep1
GSM897811 DKO1_NoE
This SuperSeries is composed of the following SubSeries:
GSE36580 AcceSssIble: an array-based assay for the study of chromatin accessibility and DNA methylation using the CpG methyltransferase SssI
GSE43851 Functional DNA methylation is accompanied by chromatin accessibility [methylation]
GSE43852 Functional DNA methylation is accompanied by chromatin accessibility [gene expression]
BioProject PRJNA169076

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE38858_RAW.tar 183.1 Mb (http)(custom) TAR

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