GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
Series GSE38720 Query DataSets for GSE38720
Status Public on Jun 15, 2012
Title Time series data of HCV (JC1) infection of Huh7 cells
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Huh7/5-2 cells (Binder et al., Hepatology 2007) were mock infected (DMEM) (time points 4 and 48 h) or infected with the chimeric HCV virus Jc1 (Pietschmann et al., PNAS 2006) (all time points).
Multiplicity of infection was 15 (TCID50). Cells were lysed after 4, 12, 24, 48 and 72 hours post infection and total cellular RNA was prepared.
Overall design Mock infected cells serve as controls for the infected samples. The whole experiment was repeated on independent days (2 biological replicates).
Contributor(s) Binder M, Bartenschlager R, Trippler M, Kandasamy K, Pichlmair A, Superti-Furga G
Citation(s) 22810585
Submission date Jun 14, 2012
Last update date Dec 06, 2018
Contact name Kumaran Kandasamy
Phone 4314016070050
Fax 4314016070050
Organization name Center for Molecular Medicine
Street address Lazarettgasse 14, AKH BT25.3
City Vienna
State/province Vienna
ZIP/Postal code 1090
Country Austria
Platforms (1)
GPL571 [HG-U133A_2] Affymetrix Human Genome U133A 2.0 Array
Samples (14)
GSM948651 Huh7/5-2 uninfected 4 h biological replicate 1
GSM948652 Huh7/5-2 uninfected 4 h biological replicate 2
GSM948653 Huh7/5-2 infected 4 h biological replicate 1
BioProject PRJNA168577

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE38720_RAW.tar 28.8 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap