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Series GSE38677 Query DataSets for GSE38677
Status Public on Nov 30, 2012
Title Mapping of Transcription Start Sites of Normal and Cancerous Prostate Cells
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Capped analysis of gene expression (CAGE) sequencing was done on a normal and a cancer cell line to examine how promoter usage changes between these two states.
Overall design One PrEC sample, a normal cell line. One LNCaP sample, a cancer cell line.
Contributor(s) Statham A
Citation(s) 23245995
Submission date Jun 13, 2012
Last update date May 15, 2019
Contact name Aaron Statham
Organization name Garvan Institute of Medical Research
Department Cancer Department
Lab Epigenetics Research Laboratory
Street address 384 Victoria St
City Darlinghurst
State/province NSW
ZIP/Postal code 2010
Country Australia
Platforms (1)
GPL10999 Illumina Genome Analyzer IIx (Homo sapiens)
Samples (2)
GSM947446 Transcription Start Site Sequencing of PrEC Cells
GSM947447 Transcription Start Site Sequencing of LNCaP Cells
This SubSeries is part of SuperSeries:
GSE38685 Normal and Cancerous Prostate Cells
BioProject PRJNA168461
SRA SRP013725

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE38677_RAW.tar 23.0 Mb (http)(custom) TAR (of BW)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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