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Series GSE38268 Query DataSets for GSE38268
Status Public on Nov 30, 2012
Title 450k Analysis of 3 FF HPV+ and 3 FF HPV- HNSCC samples
Organism Homo sapiens
Experiment type Methylation profiling by array
Summary The methylation analysis of 3 FF HPV+ HNSCC samples and 21 FP HPV- HNSCC samples by Infinium HumanMethylation450 BeadChip
Overall design Analysis of 6 450k methylation profiles, comprising 3 HPV+ HNSCC samples and 3 HPV- HNSCC samples
Contributor(s) Lechner M, Fenton T, West J, Wilson G, Feber A, Thirlwell C, Dibra HK, Jay A, Butcher L, Gratrix F, Patel N, Vaz F, O'Flynn P, Kalavrezos N, Teschendorff AE, Boshoff C, Beck S
Citation(s) 23419152, 25538261
Submission date May 25, 2012
Last update date Mar 22, 2019
Contact name Matthias Lechner
Organization name University College London
Department UCL Cancer Institute
Lab Medical Genomics
Street address Gower Street
City London
ZIP/Postal code WC1E 6BT
Country United Kingdom
Platforms (1)
GPL13534 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482)
Samples (6)
GSM937820 HPV- HNSCC sample FF 29
GSM937821 HPV- HNSCC sample FF 32
GSM937822 HPV+ HNSCC sample FF 39
This SubSeries is part of SuperSeries:
GSE38271 FF and FFPE HPV+ and HPV- HNSCC and HNSCC cell lines
BioProject PRJNA167712

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE38268_Matrix_processed_HNSCC_FF6.csv.gz 14.2 Mb (ftp)(http) CSV
GSE38268_Matrix_signal_intensities_HNSCC_FF6.csv.gz 15.7 Mb (ftp)(http) CSV
GSE38268_RAW.tar 183.1 Mb (http)(custom) TAR
Processed data included within Sample table
Processed data are available on Series record

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