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Series GSE38266 Query DataSets for GSE38266
Status Public on Nov 30, 2012
Title 450k Analysis of 42 FFPE HPV+ and HPV- HNSCC samples
Organism Homo sapiens
Experiment type Methylation profiling by array
Summary The methylation analysis of 21 FFPE HPV+ HNSCC samples and 21 FPPE HPV- HNSCC samples by Infinium HumanMethylation450 BeadChip
Overall design Analysis of 42 450k methylation profiles, comprising 21 HPV+ HNSCC samples and 21 HPV- HNSCC samples
Contributor(s) Lechner M, Fenton T, West J, Wilson G, Feber A, Thirlwell C, Dibra HK, Jay A, Butcher L, Gratrix F, Patel N, Vaz F, O'Flynn P, Kalavrezos N, Teschendorff AE, Boshoff C, Beck S
Citation(s) 23419152, 25538261, 23718828
Submission date May 25, 2012
Last update date Feb 03, 2020
Contact name Matthias Lechner
Organization name University College London
Department UCL Cancer Institute
Lab Medical Genomics
Street address Gower Street
City London
ZIP/Postal code WC1E 6BT
Country United Kingdom
Platforms (1)
GPL13534 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482)
Samples (42)
GSM937714 HPV- HNSCC sample FFPE 3
GSM937715 HPV+ HNSCC sample FFPE 6
GSM937716 HPV- HNSCC sample FFPE 7
This SubSeries is part of SuperSeries:
GSE38271 FF and FFPE HPV+ and HPV- HNSCC and HNSCC cell lines
BioProject PRJNA167711

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE38266_Matrix_processed_HNSCC_FFPE42.csv.gz 95.4 Mb (ftp)(http) CSV
GSE38266_Matrix_signal_intensities_HNSCC_FFPE42.csv.gz 101.3 Mb (ftp)(http) CSV
GSE38266_RAW.tar 183.1 Mb (http)(custom) TAR
Processed data included within Sample table
Processed data are available on Series record

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