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Series GSE36363 Query DataSets for GSE36363
Status Public on May 17, 2012
Title Human lung adenocarcinoma DNA copy number profiling
Organism Homo sapiens
Experiment type Genome variation profiling by SNP array
Summary Lung adenocarcinoma’s genomic alterations exhibit vast variation. Lung adenocarcinoma also has previously described intrinsic gene expression subtypes (Hayes et al. 2006, PMID: 17075127). This study’s aim was to detect and validate subtype-specific alterations. A portion of these specimens were also assayed for genomewide transcription in GSE26939.
 
Overall design 103 tumor samples and 30 normal samples were quantified for DNA copy number using Affymetrix SNP microarrays.
 
Contributor(s) Wilkerson MD, Hayes DN
Citation(s) 22590557
Submission date Mar 08, 2012
Last update date Nov 27, 2018
Contact name Matthew D Wilkerson
E-mail(s) mwilkers@med.unc.edu
Phone 919-966-3864
Fax 919-966-8212
URL http://cancer.unc.edu/nhayes
Organization name University of North Carolina at Chapel Hill
Department Lineberger Comprehensive Cancer Center
Lab D. Neil Hayes
Street address 450 West Drive
City Chapel Hill
State/province NC
ZIP/Postal code 27599-7295
Country USA
 
Platforms (2)
GPL3720 [Mapping250K_Sty] Affymetrix Mapping 250K Sty2 SNP Array
GPL6801 [GenomeWideSNP_6] Affymetrix Genome-Wide Human SNP 6.0 Array
Samples (133)
GSM889587 tumor 1
GSM889588 tumor 2
GSM889589 tumor 3
This SubSeries is part of SuperSeries:
GSE36471 Human lung adenocarcinoma
Relations
BioProject PRJNA155569

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE36363_RAW.tar 3.3 Gb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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