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Series GSE35616 Query DataSets for GSE35616
Status Public on Dec 07, 2012
Title Sip1 in cortical interneuron migration
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary We sequenced mRNA from 6 samples of FACsorted telencephalons from E14.5 Sip1|Nkx2-1 knockout and WT|Nkx2-1 control mouse embryos to find differentially expressed genes in the absence of the transcription factor Sip1.
Overall design Examination of mRNA levels in 3 control and 3 Sip1|Nkx2-1 knockout samples
Contributor(s) Seuntjens E, Van de Sande B, Aerts S
Citation(s) 23312517
Submission date Feb 07, 2012
Last update date May 15, 2019
Contact name Bram Van de Sande
Phone +32 16 33 01 42
Organization name KU Leuven
Department Center for Human Genetics
Lab Laboratory for Computational Biology
Street address Herestraat 49
City Leuven
ZIP/Postal code 3000
Country Belgium
Platforms (1)
GPL13112 Illumina HiSeq 2000 (Mus musculus)
Samples (6)
GSM871703 K77.5-WT
GSM871704 K77.6-KO
GSM871705 K79.4-KO
SRA SRP010804
BioProject PRJNA152545

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE35616_DESeq.txt.gz 988.9 Kb (ftp)(http) TXT
GSE35616_RAW.tar 800.0 Kb (http)(custom) TAR (of TXT)
GSE35616_matrix_table.txt.gz 292.3 Kb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file
Processed data are available on Series record

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