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Series GSE35401 Query DataSets for GSE35401
Status Public on Dec 19, 2012
Title Dysregulation of cholesterol homeostasis in human prostate cancer through loss of ABCA1
Organism Homo sapiens
Experiment type Expression profiling by array
Summary We conducted gene expression profilling of common prostate cell lines for comparison with genome-wide DNA methylation profiles for the same cell lines to study the impact of differential DNA methylation in prostate cancer.
 
Overall design Total RNA was extracted from 3 biological replicate sets of PrEC, RWPE-1, DU 145, and LNCaP cells.
This Series represents the gene expression profiling data only. The methyl-Seq data were submitted directly to SRA and are represented by accession SRA049689.1.
 
Contributor(s) Ting AH
Citation(s) 23233737
Submission date Jan 29, 2012
Last update date Mar 20, 2017
Contact name Angela Ting
E-mail(s) tinga@ccf.org
Organization name Cleveland Clinic
Department Genomic Medicine
Street address 9500 Euclid Ave/NE50
City Cleveland
State/province Ohio
ZIP/Postal code 44195
Country USA
 
Platforms (1)
GPL6883 Illumina HumanRef-8 v3.0 expression beadchip
Samples (12)
GSM867432 PrEC-1
GSM867433 RWPE-1-1
GSM867434 DU 145-1
Relations
BioProject PRJNA152789

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE35401_RAW.tar 3.9 Mb (http)(custom) TAR
GSE35401_non-normalized.txt.gz 1.9 Mb (ftp)(http) TXT
Processed data included within Sample table

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