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| Status |
Public on Jan 27, 2012 |
| Title |
5-aza-2'-cytidine and trichostatin A effect to gene expression of Epstein-Barr virus-transformed human lymphoblastoid cell lines (LCLs). |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by array
|
| Summary |
Investigation of 5-aza-2'-cytidine and trichostatin A effect to gene expression of human LCLs. LCLs estabulished from patients with genetic dissease are commonly used for mRNA or protein analysis of disease related genes. However, ofen times the gene of interset is not expressed in LCL. Epigenetic modification could be overcome this problem.
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| Overall design |
Expression array study with total RNA extracted from normal male derived LCLs with eight 60-mer probe per gene. 47633 exemplar genes representing a total of 63780 transcripts variants.
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| Contributor(s) |
Niida Y |
| Citation missing |
Has this study been published? Please login to update or notify GEO. |
| |
| Submission date |
Jan 26, 2012 |
| Last update date |
Mar 23, 2012 |
| Contact name |
Yo Niida |
| E-mail(s) |
niida@staff.kanazawa-u.ac.jp
|
| Organization name |
Kanazawa Univ.
|
| Street address |
13-1 Takaramachi
|
| City |
Kanazawa |
| State/province |
Ishikawa |
| ZIP/Postal code |
920-8641 |
| Country |
Japan |
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| Platforms (1) |
| GPL15143 |
NimbleGen Human Expression Array [2006-08-03_HG18_60mer_expr] |
|
| Samples (4)
|
| GSM866775 |
cultured with 5-aza-2'-cytidine and trichostatin A |
|
| Relations |
| BioProject |
PRJNA152745 |
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