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Series GSE34962 Query DataSets for GSE34962
Status Public on Feb 22, 2012
Title Epigenetic profiling of WT and Ezh2-null MLL-AF9 murine leukemic cells
Organism Mus musculus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary Chromatin immunoprecipitation (ChIP) for H3K27me3 followed by Solexa sequencing in WT and Ezh2-null leukemic cells from primary and secondary recipients.
Overall design Leukemic cells from primary and secondary recipients of MLL-AF9-transduced WT and Ezh2-null cells were sorted for GFP and YFP expression and analyzed by Chip-Seq.
Contributor(s) Sinha A, Neff T, Armstrong S
Citation(s) 22396593
Submission date Jan 09, 2012
Last update date May 15, 2019
Contact name Amit Sinha
Phone 617-582-7579
Organization name Dana-Farber Cancer Institute
Department Pediatric Oncology
Lab Armstrong Lab
Street address 44 Binney St
City Boston
State/province MA
ZIP/Postal code 02135
Country USA
Platforms (1)
GPL13112 Illumina HiSeq 2000 (Mus musculus)
Samples (4)
GSM859592 H3K27me3_1'AML_WT
GSM859593 H3K27me3_1'AML_Ezh2-null
GSM859594 H3K27me3_2'AML_WT
This SubSeries is part of SuperSeries:
GSE34963 The Polycomb Repressive Complex 2 Is Required For MLL-AF9 Leukemia
SRA SRP010283
BioProject PRJNA156139

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE34962_RAW.tar 253.9 Mb (http)(custom) TAR (of WIG)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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