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Series GSE34550 Query DataSets for GSE34550
Status Public on Aug 08, 2012
Title Systematic RNA-seq analysis of the early events of CD4+ T cell activation
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary RNA-seq was used to look at the transcriptome changes and the early events of T cell receptor stimulation in CD4+ T cells
Overall design CD4+ T cells were stimulated with immobilised anti-CD3/CD28 antibodies for 4 hours and RNA was extracted and subjected to RNA-seq analysis.
Contributor(s) Hutchins AP, Miranda-Saavedra D
Citation(s) 22884873
Submission date Dec 19, 2011
Last update date May 15, 2019
Contact name Andrew P Hutchins
Organization name Southern University of Science and Technology
Department Bioinformatics
Lab Bioinformatics and Genomics
Street address 1088 Xueyuan Rd
City Shenzhen
ZIP/Postal code 518055
Country China
Platforms (1)
GPL13112 Illumina HiSeq 2000 (Mus musculus)
Samples (2)
GSM850875 RNA-seq of mock (untreated) CD4+ T cells
GSM850876 RNA-seq of anti-CD3/anti-CD28 treated CD4+ T cells_4 hours
SRA SRP009895
BioProject PRJNA151367

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Supplementary file Size Download File type/resource
GSE34550_RAW.tar 3.9 Mb (http)(custom) TAR (of BED)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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