|
| Status |
Public on Nov 01, 2011 |
| Title |
Sequentially acting Sox transcription factors in neural lineage development [RNA-seq] |
| Organism |
Mus musculus |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
We report sequential binding but unique functions of different Sox transcription factors during distinct stages of neural differentiation
|
| |
|
| Overall design |
Loss of function experiment for Sox2/Sox3 in neural progenitor cells and gene expression profile for Sox11 expressing (PSA NCAM sorted) early formed neurons.
|
| |
|
| Contributor(s) |
Bergsland M, Ramsköld D, Muhr J, Sandberg R |
| Citation(s) |
22085726 |
| Submission date |
Oct 18, 2011 |
| Last update date |
May 15, 2019 |
| Contact name |
Rickard Sandberg |
| E-mail(s) |
Rickard.Sandberg@ki.se
|
| Organization name |
Karolinska Institutet
|
| Department |
Department of Cell and Molecular Biology
|
| Street address |
Berzelius vag 35
|
| City |
Stockholm |
| ZIP/Postal code |
17177 |
| Country |
Sweden |
| |
|
| Platforms (1) |
| GPL11002 |
Illumina Genome Analyzer IIx (Mus musculus) |
|
| Samples (6)
|
| GSM818951 |
RNA-Seq PSA NCAM+ neurons, biol repl 1 |
| GSM818952 |
RNA-Seq PSA NCAM+ neurons, biol repl 2 |
| GSM818953 |
RNA-Seq Sox2/Sox3 siRNA in neural progenitor cells, after 24h |
| GSM818954 |
RNA-Seq Sox2/Sox3 siRNA in neural progenitor cells, after 48h |
| GSM818955 |
RNA-Seq Universal siRNA control in neural progenitor cells, after 48h |
| GSM818956 |
RNA-Seq Neural progenitor cells, after 24h |
|
| This SubSeries is part of SuperSeries: |
| GSE33024 |
Sequentially acting Sox transcription factors in neural lineage development |
|
| Relations |
| SRA |
SRP009041 |
| BioProject |
PRJNA154421 |
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