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Series GSE33060 Query DataSets for GSE33060
Status Public on Nov 01, 2011
Title Sequentially acting Sox transcription factors in neural lineage development [RNA-seq]
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary We report sequential binding but unique functions of different Sox transcription factors during distinct stages of neural differentiation
Overall design Loss of function experiment for Sox2/Sox3 in neural progenitor cells and gene expression profile for Sox11 expressing (PSA NCAM sorted) early formed neurons.
Contributor(s) Bergsland M, Ramsköld D, Muhr J, Sandberg R
Citation(s) 22085726
Submission date Oct 18, 2011
Last update date May 15, 2019
Contact name Rickard Sandberg
Organization name Karolinska Institutet
Department Department of Cell and Molecular Biology
Street address Berzelius vag 35
City Stockholm
ZIP/Postal code 17177
Country Sweden
Platforms (1)
GPL11002 Illumina Genome Analyzer IIx (Mus musculus)
Samples (6)
GSM818951 RNA-Seq PSA NCAM+ neurons, biol repl 1
GSM818952 RNA-Seq PSA NCAM+ neurons, biol repl 2
GSM818953 RNA-Seq Sox2/Sox3 siRNA in neural progenitor cells, after 24h
This SubSeries is part of SuperSeries:
GSE33024 Sequentially acting Sox transcription factors in neural lineage development
SRA SRP009041
BioProject PRJNA154421

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE33060_FPKM.txt.gz 746.2 Kb (ftp)(http) TXT
GSE33060_RAW.tar 479.6 Mb (http)(custom) TAR (of BED)
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Raw data are available in SRA
Processed data provided as supplementary file
Processed data are available on Series record

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